Saturday, August 02, 2014

John Hagelin - Consciousness, a Quantum Physics Perspective


John Hagelin is a particle physicist and director of the Transcendental Meditation movement for the United States. When he was still a serious physicist, he was a researcher at the European Organization for Nuclear Research (CERN) (1981–1982) and the Stanford Linear Accelerator Center (SLAC) (1982–1983).

Hagelin is now Professor of Physics and Director of the Institute of Science, Technology and Public Policy at Maharishi University of Management (MUM). In recent years, his research has focused on connecting consciousness and the unified field theory. His ideas are considered fringe by the physics community and by cognitive scientists.

Despite this (or maybe because of this), he is widely cited by those who believe consciousness is primary to the existence of the universe, a position I have often criticized here. For example, he was featured in two of the most popular New Age "woo" movies, What the Bleep Do We Know? and The Secret - the first an example of how failing to understand science allows one to make all kinds of silly claims (as well as being a front for JZ Knight's Ramtha nonsense), and the second an example of how materialism and narcissism can be made to appear spiritual.

This summary is from Wikipedia:
Efforts to link consciousness to the unified field

Hagelin has attempted to combine his two area of expertise, linking Transcendental Meditation's view of consciousness with physical cosmology. Science writer Chris Andersen, Dallas Observer political reporter Jonathan Fox and physicist Peter Woit have written critically about Hagelin's research and publications in this area.[14][16][20]

In a 1992 news article for Nature about Hagelin's first presidential campaign, Anderson wrote that Hagelin, was "by all accounts a gifted researcher well known and respected by his colleagues" but that his effort to link grand unified theories of physics to Transcendental Meditation "infuriates his former collaborators."[20] He cited physicist John Ellis' fear that "people might regard [Hagelin's assertions] as rather flaky, and that might rub off on the theory or on us."[20] Fox observed that, while "once considered a top scientist, Hagelin's former academic peers ostracized him after the candidate attempted to shoehorn Eastern metaphysical musings into the realm of quantum physics."[16] In his book, Not Even Wrong: The Failure of String Theory and The Search for Unity In Physical Law, Woit acknowledged that Hagelin had published papers in prestigious journals that would eventually be cited in over a hundred other papers, but that identification of a unified field of consciousness with a unified field of superstring theory was wishful thinking and that most physicists thought Hagelin's views on this topic were nonsense.[14]

Hagelin's linkage of quantum mechanics and unified field theory with consciousness was also critiqued by University of Iowa philosophy and sociology professors Evan Fales and Barry Markovsky in 1997, in the journal Social Forces. They wrote that the connection relied on similarity between properties of quantum mechanical fields and consciousness, but that the parallels Hagelin highlighted between unified field theories and the Vedas rested on ambiguity, obscurity and vague analogy supported by the construction of arbitrary similarities.[26]

Hagelin was featured in the movies What the Bleep Do We Know!?,[27] and The Secret.[28] What the Bleep Do We Know? was described by Michael Shermer, writing in Scientific American, as being filled with "New Age scientists whose jargon-laden sound bites amount to little more than what California Institute of Technology physicist and Nobel laureate Murray Gell-Mann once described as 'quantum flapdoodle.'"[29]
In a sense, it's sad that Hagelin is where he is now. Prior to leaving the Stanford Linear Accelerator Center in 1983, he had authored a couple a very highly cited papers in particle physics. One wonders what may have been possible if he had not gone off into the wilderness.

This talk was given at Stanford University, interestingly enough.

John Hagelin - Consciousness, a Quantum Physics Perspective

Published on Aug 1, 2014

Renowned quantum physicist, John Hagelin (PhD, Harvard), presents the thesis that consciousness is a unified field that contains nature's programming code and transcending through meditation is a pathway to hack / access consciousness.

How Does a Neuron “Know” to Modulate its Epigenetic Machinery in Response to Early-Life Environment/Experience?

Here is another article from the Frontiers in Molecular Psychiatry topic collection on Epigenetic pathways in PTSD: how traumatic experiences leave their signature on the genome.

This review article looks at how sensory input from the mother during the first few postnatal months can trigger epigenetic changes in brain neurons.
We focus on the lasting effects of this early-life experience on corticotropin-releasing hormone (CRH) gene expression in the hypothalamus, and describe recent work that integrates organism-wide signals with cellular signals that in turn impact epigenetic regulation. We describe the operational brain networks that convey sensory input to CRH-expressing cells, and highlight the resulting “re-wiring” of synaptic connectivity to these neurons. We then move from intercellular to intracellular mechanisms, speculating about the induction, and maintenance of lifelong CRH repression provoked by early-life experience.
If we can understand the links between experience and gene expression, they postulate (correctly, in my opinion), we may then understand how stress responses trigger those mechanisms such that a child is either vulnerable to or resilient against PTSD. 

Full Citation: 
Karsten, CA, and Baram, TZ. (2013, Aug 15). How does a neuron “know” to modulate its epigenetic machinery in response to early-life environment/experience? Frontiers in Molecular Psychiatry 4:89. doi: 10.3389/fpsyt.2013.00089

How does a neuron “know” to modulate its epigenetic machinery in response to early-life environment/experience?

Carley A. Karsten [1,2] and Tallie Z. Baram [1,2]
1. Department of Anatomy and Neurobiology, University of California-Irvine, Irvine, CA, USA
2. Department of Pediatrics, University of California-Irvine, Irvine, CA, USA


Exciting information is emerging about epigenetic mechanisms and their role in long-lasting changes of neuronal gene expression. Whereas these mechanisms are active throughout life, recent findings point to a critical window of early postnatal development during which neuronal gene expression may be persistently “re-programed” via epigenetic modifications. However, it remains unclear how the epigenetic machinery is modulated. Here we focus on an important example of early-life programing: the effect of sensory input from the mother on expression patterns of key stress-related genes in the developing brain. We focus on the lasting effects of this early-life experience on corticotropin-releasing hormone (CRH) gene expression in the hypothalamus, and describe recent work that integrates organism-wide signals with cellular signals that in turn impact epigenetic regulation. We describe the operational brain networks that convey sensory input to CRH-expressing cells, and highlight the resulting “re-wiring” of synaptic connectivity to these neurons. We then move from intercellular to intracellular mechanisms, speculating about the induction, and maintenance of lifelong CRH repression provoked by early-life experience. Elucidating such pathways is critical for understanding the enduring links between experience and gene expression. In the context of responses to stress, such mechanisms should contribute to vulnerability or resilience to post-traumatic stress disorder (PTSD) and other stress-related disorders.


Neuronal gene expression is amenable to re-programing by environment and experience (13). The neuroendocrine stress axis is influenced by environment and experience during early postnatal development, and these changes endure. For example, maternal-derived sensory input is critical for setting the tone of the hypothalamus-pituitary-adrenal (HPA) axis for life via changes in the expression of glucocorticoid receptor (GR) in the hippocampus and of hypothalamic corticotropin-releasing hormone (CRH). High levels, or predictable bouts, of maternal-derived sensory stimulation result in an attenuated stress response and resilience to stress (4, 5). In contrast, early-life stress causes adults to exhibit augmented stress responses and cognitive impairments, associated with changes in expression of CRH and GR (68). Recently, it has been proposed that it is the patterns of maternal care that contribute crucially to the perception of stress early in life, and to the subsequent modulation of brain function. Thus, chaotic, fragmented sensory inputs from the mother influence neuronal networks involved in stress for the life of the animal in a direction opposite to that of predictable and consistent patterns (9). Thus, an important common basis may exist for both the beneficial and the adverse consequences of early-life experiences: the pattern of sensory input onto the developing brain might constitute an important parameter that influences the function of stress-sensitive neurons throughout life.

It is suspected that the endurance of the effects of sensory input during this critical period derives from activation of epigenetic mechanisms leading to changes in gene expression that are maintained throughout the lifetime. Here we review the neuroanatomical and molecular pathways bridging sensory input on a whole-brain scale with gene expression programing after distinct early-life experiences. We discuss the implications of these processes to post-traumatic stress disorder (PTSD).

Epigenetics and Early-Life Experience

The nature of epigenetic mechanisms is amply discussed throughout this collection of papers, and will not be described in detail here. Epigenetics offers an enticing explanation for how relatively brief sensory experiences may lead to long-lasting changes in neuronal function. Indeed, changes in components of chromatin, including DNA methylation or histone modifications have been examined after early-life experience, and found in several key genes involved in regulation of the HPA axis [GR, (10); CRH, (11); arginine vasopressin, (12)]. Here we focus on the lasting repression of CRH in hypothalamic neurons that results from positive maternal care early in life (13). This finding has been confirmed by numerous subsequent studies (4, 5). We focus on the CRH gene both as an important regulator of the stress response (14) and as a likely contributor to the phenotype engendered by nurturing early-life maternal signals, because modulation of CRH function through blocking of CRH receptor type 1 recapitulated the effects of augmented maternal care in non-nurtured pups (15). A second reason for a focus on the CRH gene is its use as a “marker” gene: the reliable detection of CRH repression after augmented maternal care suggests that understanding the mechanism that represses CRH expression enduringly might provide a key to understanding general processes that influence expression programs involving numerous other genes as well. Finally, in the context of the current review, a significant body of literature has implicated aberrant expression and central (CSF) release of CRH in the pathophysiology of PTSD (1619).

How Does a CRH-Expressing Neuron Know to Modulate CRH Gene Expression?

Corticotropin-releasing hormone gene expression is regulated by transcription factors, and these in turn are activated by signals that reach the nucleus from the membrane, and often involve calcium signaling (20). Synaptic input onto the CRH-expressing neuron includes a number of neurotransmitters, of which glutamate constitutes a major excitatory input (21). Indeed, glutamatergic signaling in the PVN is necessary for the initiation of the endocrine stress response, and glutamate receptor agonists delivered to the PVN drive CRH release (22, 23). Recent research has revealed that early-life augmented care leads to a transient reduction in the number and function of glutamatergic synapses to CRH neurons in the PVN (11). Using several methods (immunohistochemistry, electron microscopy, and electrophysiology), Korosi et al. discovered that (1) the number of glutamatergic terminals abutting CRH-positive neurons was reduced, (2) the number of asymmetric, putative excitatory terminal boutons onto CRH neurons was reduced, and (3) the frequency of spontaneous excitatory postsynaptic currents to PVN neurons was dramatically reduced (Figure 1). The same measures were taken in the thalamus and yielded no changes. Similarly, there were no changes in markers of inhibitory transmission. Together these data strongly support the notion that augmented maternal care reduces excitatory drive to the CRH-expressing neuron in the PVN.

Figure 1. Augmented early-life experience reduces the number and function of excitatory synapses in the paraventricular nucleus of the hypothalamus (PVN). (A) Total number of synapses was reduced by 50%, attributable to a 70% reduction of asymmetric (excitatory) synapses onto CRH-expressing neurons in the PVN. (B) Levels of the vesicular transporter vGlut2, a marker of glutamate-containing synaptic vesicles, were reduced by approximately 40% in rats with augmented early-life experience relative to controls. (C) Miniature excitatory postsynaptic currents (mEPSC) frequency was reduced by 60% in putative CRH neurons. Adapted from Ref. (11) with permission from the Journal of Neuroscience.
Whereas the correlation between reduction in excitation and reduction of CRH expression is suggestive, it does not answer the question of causality: is reduced glutamatergic input to a CRH cell required and sufficient to repress CRH? To address this question, in vitro methods have been initiated, with the use of organotypic hypothalamic slice cultures to isolate the PVN. In this system, application of glutamate receptor antagonists (blocking both AMPA- and NMDA-type receptors) can effectively eliminate ionotropic glutamatergic transmission. Pilot data suggests that this manipulation may suffice to repress CRH mRNA levels compared to vehicle-treated controls (24). These initial findings are consistent with the notion that augmented maternal care reduces excitatory drive to the PVN, which in turn leads to reduced CRH mRNA production.

How Does the Sensory Signal from Maternal Care Reach the PVN and Serve to Reduce Excitatory Synapse Number and Function?

Maternal input to her progeny consists of a variety of stimuli, among which sensory stimuli and especially touch (licking, grooming) appear to be the most important (2527). Levine’s group demonstrated that augmented HPA responses to stress caused by 24 h maternal deprivation could be prevented by stroking the pups, highlighting the importance of tactile stimulation to normal development of HPA activity (28). Using brain-mapping methods, the pathways through which these signals reach the PVN have been identified (29).

Glutamate-specific retrograde tracing revealed that excitatory afferents terminating in the PVN originate in the paraventricular thalamus (PVT), lateral septum, bed nucleus of the stria terminalis (BNST), and amygdala (30). The BNST integrates and relays signals from the limbic forebrain and amygdala and provides both inhibitory and excitatory drive to the PVN. Specifically, posterior sub-regions inhibit stress-induced CRH expression in the PVN, whereas anterior regions facilitate it (31). The central nucleus of the amygdala (CeA), important for integration of autonomic inputs, facilitates CRH release from the PVN (Figure 2), likely via the BNST (32, 33).

Figure 2. Proposed circuitry involved in conveying maternal-derived sensory input to CRH-expressing neurons in the PVN. The PVN receives excitatory and inhibitory projections, including projections from the amygdala, paraventricular thalamic nucleus (PVT), and bed nucleus of the stria terminalis (BNST). These regions are also interconnected by excitatory projections (solid black lines). (A) The amygdala and BNST are both activated after a single day of handling-evoked augmented maternal care, and in turn stimulate the PVN (29). (B) The PVT is not activated after a single day of augmented maternally derived sensory input, but is recruited by recurrent daily barrages. This is thought to activate regions of the BNST that inhibit CRH-expressing neurons in the PVN (31). It is not fully known how this series of events promotes reduced numbers of excitatory synapses on CRH-expressing neurons.
Importantly, both the CeA and BNST are activated by maternal care. Handling rat pups evokes a burst of nurturing behavior (licking and grooming) by the dam upon the pups’ return to the home cage. A single instance of handling results in c-fos activation in both BNST and CeA (29), yet did not influence CRH expression. In contrast, recurrent handling for a week, which led to repression of CRH expression, was associated with c-fos activation also within the PVT (29). This suggests that the contribution of the PVT to the overall circuit that conveys maternal signals to the CRH cells in the PVN is important to reduce the expression of the gene. The PVT has been shown to play an important role in stress memory and adaptation (34, 35). The PVT sends afferents to the PVN, and possesses bidirectional connections with the CeA and BNST (36). Considering that the majority of PVT output to the structures described above are excitatory, how might PVT activation result in repression of the PVN? Here, we speculate that activation of the PVT might excite BNST regions that are known to inhibit CRH expression in the PVN (Figure 2).

Initiation vs. Maintenance of Epigenetic Repression of CRH by Early-Life Experience

When considering the changes in gene expression that occur after augmented maternal care, it is important to note two key differences in timing. Repression of CRH begins around postnatal day 9 and persists through adulthood, while changes in glutamatergic signaling to the PVN were noted only at P9 and were back to control levels by P45 (11). This suggests that following the initiation signal mediated by reduction of glutamatergic signaling, there may be additional factors that are involved in maintaining the repression of gene expression that persists long past the initiating signal. Such factors are likely to be epigenetic in nature.

A likely suspect is the neuronal repressor neuron restrictive silencer factor (NRSF). NRSF is a transcription factor that silences gene expression via epigenetic modifications. The CRH intron contains a functional NRSF binding sequence (37), suggesting that the programing of the crh gene during early postnatal life may be due to NRSF activity. In fact, NRSF levels in the PVN are dramatically upregulated following augmented maternal care, starting at P9 and persisting into adulthood (11). This pattern is an inverse correlate of CRH expression levels following augmented maternal care, supporting the idea that NRSF may be involved in mediating CRH repression.
Implications for PTSD

Post-traumatic stress disorder is often associated with a history of early-life trauma (19, 3840), and more specifically with chronic stressful situations such as abuse and long-lasting war rather than an acute event (4147). PTSD is characterized by a persistently dysregulated stress response (19, 48, 49), and it is reasonable to assume that chronic early-life stressful events influences an individual’s stress response to promote PTSD. There are several processes that might account for altered stress responses in PTSD. It has been posited that the hypothalamic-pituitary-adrenal axis is permanently sensitized by chronic early-life abuse, and this creates a vulnerability to subsequent trauma, resulting in PTSD. However, the mechanism of such sensitization is unclear. Here we provide a novel and plausible solution: if chronic early-life predictable and nurturing maternal care can reduce excitatory synaptic input onto stress-sensitive neurons in the hypothalamus, and hence “desensitize” future stress responses, then might abusive, erratic, or neglectful maternal behavior provoke the opposite? Augmentation of excitatory input to hypothalamic CRH cells may well serve to sensitize CRH release to future stresses. Whereas this notion is speculative at this point, it is highly amenable to direct testing in animal models. A second possible basis of the abnormal stress response in PTSD that follows early-life chronic stress/abuse may include aberrant regulation of the expression of relevant genes, such as CRH. Here we provide insight into how early-life experience – nurturing or adverse – can result in persistently altered regulation of CRH expression. The lifelong changes in CRH release and expression that result from chronic early-life experiences may provide the neurobiological basis for resilience or vulnerability to subsequent stress, and hence to the development of PTSD.

Conflict of Interest Statement

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.


The excellent editorial assistance of Mrs. Barbara Cartwright is appreciated. Authors’ research has been supported by NIH grants NS28912; MH73136 NS 45260 (CM Gall, PI).

References available at the Frontiers site

Friday, August 01, 2014

Making Memories of Stressful Events: Epigenetics, Gene Transcription, and Signaling Pathways

Below is another of the articles from the Epigenetic pathways in PTSD: how traumatic experiences leave their signature on the genome, a research topic collection from Frontiers in Molecular Psychiatry.

One of things therapists see often, and survivors of trauma are no doubt aware, is that memories of stressful events seem to be more powerful encoded into the brain than non-traumatic events. Evolutionarily, this makes sense and likely provided survival skills to our ancestors. But we do not yet fully grasp the genetics involved in this process - this article is a step toward resolving that mystery.

Full Citation: 
Reul, JMHM. (2014, Jan 22). Making memories of stressful events: a journey along epigenetic, gene transcription, and signaling pathways. Frontiers in Psychiatry: Molecular Psychiatry; 5:5. doi: 10.3389/fpsyt.2014.00005

Making memories of stressful events: a journey along epigenetic, gene transcription, and signaling pathways

Johannes M. H. M. Reul
Neuro-Epigenetics Research Group, School of Clinical Sciences, University of Bristol, Bristol, UK

Strong psychologically stressful events are known to have a long-lasting impact on behavior. The consolidation of such, largely adaptive, behavioral responses to stressful events involves changes in gene expression in limbic brain regions such as the hippocampus and amygdala. However, the underlying molecular mechanisms were until recently unresolved. More than a decade ago, we started to investigate the role of glucocorticoid hormones in signaling and epigenetic mechanisms participating in the effects of stress on gene transcription in hippocampal neurons. We discovered a novel, rapid non-genomic mechanism in which glucocorticoids via glucocorticoid receptors facilitate signaling of the ERK-MAPK signaling pathway to the downstream nuclear kinases MSK1 and Elk-1 in dentate gyrus granule neurons. Activation of this signaling pathway results in serine10 (S10) phosphorylation and lysine14 (K14) acetylation at histone H3 (H3S10p-K14ac), leading to the induction of the immediate-early genes c-Fos and Egr-1. In addition, we found a role of the DNA methylation status of gene promoters. A series of studies showed that these molecular mechanisms play a critical role in the long-lasting consolidation of behavioral responses in the forced swim test and Morris water maze. Furthermore, an important role of GABA was found in controlling the epigenetic and gene transcriptional responses to psychological stress. Thus, psychologically stressful events evoke a long-term impact on behavior through changes in hippocampal function brought about by distinct glutamatergic and glucocorticoid-driven changes in epigenetic regulation of gene transcription, which are modulated by (local) GABAergic interneurons and limbic afferent inputs. These epigenetic processes may play an important role in the etiology of stress-related mental disorders such as major depressive and anxiety disorders like post-traumatic stress disorder.


The mnemonic function of the brain is one of its most important cognitive attributes. Making memories of events in our lives is vital in order to find, also quite literally, our way around in life. The formation of memories allows us to interact spatially, socially, and otherwise with our environment. As memories are built on representations from the environment, they are a pivotal part of how we adapt to changes in the environment thereby preparing us cognitively, emotionally, and physiologically should a similar situation occur in the future. We make particularly strong memories of traumatically stressful events in our lives. Most people cope well with such ordeals and stay healthy suggesting that they have adapted successfully. Some people however develop an anxiety disorder like post-traumatic stress disorder (PTSD), which seriously compromises their quality of life for a long time, often life-long. They are burdened by nightmares, reliving the incident recurrently, negative associations, mood swings, strong vegetative characteristics, and other debilitating symptoms. Clearly, strong memories have been encoded in these individuals but adaptation and coping mechanisms have failed. Until now, the question why 10–20% of the population develops a stress-related disorder after experiencing a traumatic, often life-threatening experience has remained unanswered. In order to answer this question, we need to obtain insight into how stress interacts with the emotional and cognitive processing of an event at the molecular level in the brain. Obtaining this knowledge is fundamental to answering the question about the neurobiological basis underlying the vulnerability for developing a stress-related mental disorder.

Animal Models

The investigation of the effects of stress on learning and memory processes in the brain requires the use of animal models. The brain region which has received most attention is the hippocampus, a limbic brain structure, which is vital for the consolidation of contextual memories and plays a major role in coordinating the behavioral, autonomic, and neuroendocrine responses to stress. It has been shown in a number of studies that stress-induced glucocorticoid hormones (corticosterone in rats and mice) enhance the consolidation of memory formation in various hippocampus-dependent behavioral models including the contextual fear conditioning paradigm, the Morris water maze, and forced swimming-induced behavioral immobility (15). In fact, stress is inherent to these behavioral tests as a rodent is not keen on receiving an electric shock or being put in a water basin, this inadvertently leading to an enhanced secretion of glucocorticoid hormone from the adrenal gland (6).

An animal model often studied with regard to the role of glucocorticoid hormones in memory consolidation is the forced swim test. The strict dependency of the behavioral immobility response of glucocorticoid receptor (GR)-occupying levels of glucocorticoid hormone has been reported independently by two research groups in Utrecht, The Netherlands, and Melbourne, Australia (3, 5). The forced swim test is a rather straightforward test consisting basically of an (initial) test and a re-test. A rat or a mouse is put in a container (diameter < 30 cm) filled with water, usually 25°C, in which it cannot stand and from which it cannot escape. Usually, rats are left in for 15 min, mice often 10 min or shorter. After initial attempts of trying to escape by struggling or climbing movements vertically along the wall and horizontal swimming movements, the animal will acquire an immobile or floating posture. In the forced swim test’s classic design, the animals are re-introduced to the water container for 5 min, 24 h after the initial test (7, 8). In this 5-min re-test, the animals struggle or swim relatively little but show mainly (70–75% of the 5-min time-period) immobility/floating behavior. Recently, we reported that animals also show this enhanced immobility behavior when tested 4 weeks after the initial forced swim test (9). The rodent displays this behavioral immobility response in the re-test because it has learnt from the previous experience that attempting to escape is futile and thus conserving energy by floating or immobility behavior is the best strategy for survival (1015). Moreover, the animal may remember that it was taken from the water at the time of the first test. Thus, the enhanced behavioral immobility behavior displayed in the re-test is an adaptive response, which is based on memories formed of the initial forced swim experience (1315). The extent of the immobility behavior displayed depends on the conditions under which the test is conducted: in warmer water (e.g., 35°C), rats show more immobility behavior whereas they show less of this behavior in cold water (19°C) (16). Under the latter conditions, presumably the animals struggle and swim more to combat the vast body temperature loss (approximately 12°C within 15 min) due to the cold water (17). These observations underline that the animals adapt their behavior in response to the context of the test (see Figure 1).


Figure 1. Behavioral immobility response in the re-test depends on the water temperature during the re-test (A). Male Wistar rats were forced to swim for 15 min in 19 or 25°C-water (test). Twenty four hours later, they were forced to swim again for 5 min in 19 or 25°C-water (re-test). The data are presented as mean percentage immobility behavior during the 5-min re-test procedure ± standard error of the mean (SEM; n = 11–15) of different test/re-test water temperature conditions (see x-axis and legend). The data show that the immobility response in the re-test depends on the water temperature during the re-test and is independent of the water temperature at the time of the initial 15-min test. At 25°C re-test water temperature, the rats present the typical immobility response irrespective of the water temperature during the initial test. At 19°C re-test water temperature, the animals show significantly lower immobility scores, also irrespective of the water temperature during the initial test. Thus, in the Re-test, rats choose a behavioral strategy to cope with a challenge depending on conditions at the time of the challenge. The differential behavioral responses were not due to different responses in plasma glucocorticoid hormone (B). Male Wistar rats were forced to swim for 15 min in 19 or 25°C-water and killed at 30 min after start of the forced swim procedure. Data are expressed as mean plasma hormone levels ± SEM (nanogram/milliliter; n = 9). Statistical analysis: (A) Two-way ANOVA: effect of test water temperature: F(1,49) = 3.718, P = 0.06 [Thus, there was a trend that if rats had swum at 19°C in the test, they would show a slightly higher immobility response in the re-test (see also Ref. (18)]. Effect of re-test water temperature: F(1,49) = 55.163, P < 0.0005. The interaction term was not statistically significant. (B) Student’s t-test: P > 0.05, not significant. Johannes M. H. M. Reul and Sabine Ulbricht conducted this study at the Max Planck Institute of Psychiatry in Munich, Germany, unpublished data.
The forced swim test has been often used as a psychopharmacological test for antidepressant drug screening. Acute treatment (up to three injections) of rats or mice with several (e.g., TCAs, SSRIs) but not all antidepressant drugs typically result in decreased immobility behavior and more struggling and swimming behavior in the test and the re-test (8). Notably, acute treatment with these drugs evokes increased extracellular concentrations of neurotransmitters like serotonin, noradrenalin, and/or dopamine in many forebrain structures; i.e., neurochemical changes, which under physiological conditions are associated with enhanced motor activity and arousal mechanisms. Accordingly, the increased struggling/swimming behavior observed after antidepressant drug administration may be explained by a disruption of the immobility behavior the animals would normally display in this test. Therefore, using the forced swim test as a pharmacological test for screening new drugs for their potential “antidepressant” activity has its limitations. Furthermore, it should be emphasized that this is a test for potential antidepressant drug action, not for depression. Hence, denoting rats or mice showing less struggling/swimming and more immobility behavior as being “depressed,” is inappropriate.

As mentioned, the behavioral immobility response observed in the re-test is critically dependent of glucocorticoid hormone action during or shortly after the initial test. Thus, glucocorticoids are needed for the acquisition and consolidation of memories associated with the stressful challenge (9, 18, 19). Behavioral responses in the re-test are impaired in adrenalectomized (ADX) rats, which can be rescued by administration of corticosterone or the synthetic glucocorticoids, dexamethasone and RU28362, but not by administration of the mineralocorticoid hormone aldosterone or the progestin progesterone (3, 5). Thus, of the two glucocorticoid-binding receptors in the brain, i.e., the mineralocorticoid receptor (MR) and the GR (2022), the latter receptor type appeared to be the participating one. Furthermore, impairment of immobility behavior in the re-test (but not in the initial test) was observed if rats were pre-treated with the GR antagonist RU38486 but not with the MR antagonists, spironolactone or RU28318 (23, 24). As RU38486 also has anti-progestin activity, the role of progestins was further clarified. It was found that the effect of RU38486 on immobility behavior could be rescued with dexamethasone but not with the synthetic progestin, R5020 (promegestone) (23). To obtain insight into the identity of the neuroanatomical substrate of the GR-mediated glucocorticoid effect on the behavioral immobility response, De Kloet et al. infused RU38486 into the dentate gyrus (DG), parafascicular nucleus, or paraventricular nucleus of the hypothalamus before the initial swim test (23). They found a significantly impaired behavioral immobility response if the drug had been infused into the DG but not into any of the other nuclei (23). These findings indicated that GRs in the DG are particularly important for the consolidation of this behavioral response.

Early Epigenetic Observations

The research pointing to a major role of glucocorticoid hormones in the forced swim test and other hippocampus-dependent tests was mainly conducted in the 1980s and early 1990s. For many years, it remained unclear how glucocorticoids are affecting these hippocampus-dependent behaviors. However, by the end of the 1990s, we made a serendipitous discovery: we found sparsely distributed granule neurons in the DG, which showed a speckled nuclear staining pattern for the chromatin-associated protein histone H3 phosphorylated at Serine10 (S10) and acetylated at Lysine14 (K14) (18). Nowadays, the code for this dual histone mark is H3S10p-K14ac. It turned out that under baseline conditions the number of immuno-positive neurons was very low but they increased considerably after psychologically stressful situations (known to be processed by the hippocampus) such as forced swimming, novelty, predator exposure, Morris water maze training, and fear conditioning (18, 25). Exposure to a cold environment or ether vapor, i.e., physical (non-hippocampal) stressors, was ineffective (18). Furthermore, we made an interesting observation that treating rats with the GR antagonists RU38486 or ORG34517 strongly inhibited the forced swimming-induced increase in H3S10p-K14ac-stained neurons in the DG (9, 18). ORG34517 is a rather novel GR antagonist, which has much less progesterone receptor antagonistic properties than RU38486 (26, 27). Based on in vitro work, it had been proposed that these epigenetic histone marks were involved in the opening of the chromatin structure rendering the hitherto silent genes located within this part of the chromatin accessible for transcription factors and other transcription-associated protein complexes and hence available for gene transcription (2830). Thus, just after the turn of the millenium, our research had found evidence for stress- and glucocorticoid-sensitive histone modifications in DG neurons, which appeared to be related to transcriptional activation; a potentially interesting phenomenon but at the time not more than that. Moreover, at the time it was unclear whether this phenomenon had any bearing on the mechanisms underlying the behavioral immobility response.

Subsequent in vitro work of Mahadevan and colleagues in Oxford, UK, showed that the H3S10p-K14ac histone marks are associated with promoters of immediate-early genes (IEGs) like fos and egr1 upon gene induction (31). We indeed found sparsely distributed c-Fos and Egr-1 immuno-positive neurons in DG of rats and mice, which increased in numbers after exposure to psychological stressors such forced swimming, novelty, and Morris water maze training (9, 18, 25, 32) (Carter et al., unpublished observation). Double immuno-fluorescence studies provided evidence that H3S10p-K14ac and c-Fos and Egr-1 protein co-localize in DG granule neurons (9, 25). Furthermore, pre-treatment of rats with the GR antagonist not only inhibited the forced swimming-evoked increase in H3S10p-K14ac in DG neurons but also strongly inhibited the stress effect on c-Fos and Egr-1 (9). Ultimate proof for a “physical” link between the H3S10p-K14 histone marks and c-Fos/Egr-1 was delivered by recent chromatin immuno-precipitation (ChIP) studies, which showed that these dual histone marks are present within the fos and egr1 gene promoters of rats after forced swimming (9). Presently, ChIP studies on the H3S10p-K14ac and other histone marks in combination with next-generation Illumina sequencing are underway to make a genome-wide assessment of all genes associated with specific histone marks under baseline and stress conditions. So, it took a journey of more than 10 years for an interesting phenomenon to evolve to a potentially important epigenomic mechanism.

As early in vitro studies had linked the H3S10p-K14ac marks to IEG induction (31), it was thought that this link was universal, i.e., occurring in every in vitro and in vivo cell system. Our findings in numerous immunohistochemical and ChIP studies do not agree with this notion. It is well-known that induction of the IEGs c-Fos and Egr-1 occurs in a wide range of brain structures after exposure of experimental animals to various acute stressors. These brain structures include the whole neocortex including the prefrontal cortex, hypothalamic, thalamic, and amygdaloid nuclei, hippocampus (DG, CA1), and many pontine and brainstem nuclei (6, 33). The neuroanatomical immuno-localization of H3S10p-K14ac has turned out to be much more restricted with highest levels present in the DG (9, 18, 25, 32). Early studies found only very few H3S10p-K14ac-positive neurons outside the DG such as those in the neocortex, amygdala, and striatum. In more recent experiments, newer generations of antibodies and implementing immuno-staining techniques, which allow better antibody penetration find stronger staining among neurons in these brain regions (Carter et al., unpublished observations). However, remarkably, ChIP studies have found that only in the DG, H3S10p-K14ac is associated with the fos and egr1 genes (9); thus, in other brain areas this dual histone mark is associated with other, as yet unknown genes. Apparently, in these brain areas histone acetylation and/or histone H3 K4 methylation is sufficient for IEG induction but this still needs to be investigated in detail. As the H3S10p-K14ac histone marks are thought to be associated with hitherto silent genes, several years ago we postulated that the c-Fos and Egr-1 gene promoters in the DG are in a different (condensed?) state than elsewhere in the brain (13, 34). In other words, the IEG promoters in this brain structure require the formation of the H3S10p-K14ac mark to open up (de-condense) to allow transcription factor binding and induction of gene transcription (14, 15).

Finding the Path to the Chromatin

Despite these findings collected over the past 10 years, it remained a mystery how GRs were affecting epigenetic and gene transcriptional changes in dentate neurons in relation to the consolidation of stress-related memories and behavioral responses. It was clear from our studies that GRs in DG neurons play an important role in the phosphorylation of S10 and the acetylation of K14 and possibly other lysine residues at the n-terminal tail of histone H3 molecules within the fos and egr1 gene promoters (9, 18). However, as GRs have no intrinsic kinase and histone acetyl-transferase activities, evidently the effects of this steroid receptor annex ligand-dependent transcription factor on H3S10p-K14ac formation were brought about in an indirect manner. Classically, GRs act through glucocorticoid-responsive elements (GREs) within promoter regions of glucocorticoid-responsive genes. Since the transient response in H3S10p-K14ac peaks at 30–60 min after stress, it was considered unlikely that GR-induced genes would be directly involved in modifying histone H3. This thought was strengthened by our observation that an injection of glucocorticoid hormone was ineffective in changing H3S10-K14ac in dentate neurons (25). Moreover, this observation excluded the possibility of a (fast) glucocorticoid effect via membrane-associated GRs. Thus, based on all available data, we postulated the involvement of (an) additional signaling pathway(s).

Since we regard the behavioral immobility response as a learned behavior, we postulated the participation of a pathway typically involved in learning and memory processes, i.e., the NMDA receptor-mediated ERK–MAPK pathway (ERK, extracellular signal-responsive kinase; MAPK, mitogen-activated protein kinase) (3538). In a series of studies, we indeed found that the NMDA receptor antagonist MK801 and the MEK1/2 (MAPK ERK kinase 1/2) inhibitor SL327 strongly inhibited the forced swimming- and novelty-induced formation of H3S10p-K14ac and IEG expression (32). The effects of the MEK inhibitor indicated the involvement of a MAPK in the signaling pathway. Immunohistochemical analyses indeed showed the transient formation of phosphorylated ERK1/2 (pERK1/2) in DG neurons after forced swimming, but not of phosphorylated p38MAPK, underlining that there is specificity in the recruited MAPK pathway (9). pERK1/2 is however not a histone H3 kinase, thus an intermediary, histone H3 kinase needed to be sought. In collaboration with Dr. Simon Arthur (University of Dundee, UK), we studied mice with a double gene deletion for MSK1/2 (mitogen- and stress-activated kinase 1/2). MSK enzymes can be activated through phosphorylation by pERK1/2 (39). In MSK1/2 knock-out mice, we found virtually an absence of forced swimming-induced H3S10p-K14ac formation and c-Fos induction in dentate granule neurons and a severe impairment of the behavioral immobility response in the re-test (32). Furthermore, Dr. David Sweatt and colleagues at Baylor College (USA) reported in MSK1 gene deleted mice an impaired performance in the Morris water maze and in the contextual fear conditioning paradigm (40). In rats, we found a transient increase in the number of sparsely distributed pMSK1/2 immuno-stained granule neurons in the DG after forced swimming (9). There was no staining of the phosphorylated form of the MSK-related kinases RSK1/2 (pRSK1/2; phosphorylated ribosomal S6 kinase 1/2), which are also substrates of pERK1/2, again underlining specificity. Elk-1 (Ets-like protein kinase) plays an important role in the induction of IEGs like c-Fos and Egr-1 (4143). In vitro work has shown that, upon phosphorylation, for instance by pERK1/2, pElk-1 can bind to the Elk-1 binding site within the SRE(s) [serum response element(s)] and exert trans-activational influences within the fos or egr1 gene promoters (42, 43). pElk-1 has been shown to fulfill these effects through recruitment of the histone acetyl-transferase p300, which after phosphorylation by pElk-1, acetylates nearby histone H3 tails at K14 and other lysine positions (42, 44). After forced swimming, we found an increase in pElk-1 stained DG neurons that time wise paralleled the responses in pERK1/2 and pMSK1/2 (9). Thus, it appears that the phosphorylation and acetylation of histone H3 occur in a coordinated fashion.

Using pharmacological tools and a gene deletion model, we had identified a pathway of interlinked signaling partners that convey extracellular signals (glucocorticoid hormones, glutamate) triggered by environmental challenges (e.g., forced swimming) to the epigenome resulting in gene transcriptional changes in DG neurons. However, the sparse distribution pattern of pERK1/2, pMSK1/2, pElk-1, H3S10p-K14ac, c-Fos, and Egr-1 immuno-positive granule neurons within the DG prompted the critical postulate that, in order to build a true signaling cascade, all signaling molecules needed to co-exist in the same neurons. GRs and NMDA receptors are ubiquitous in the DG. Elaborate double immuno-fluorescence analyses provided the final evidence that, within sparsely distributed DG granule neurons, forced swimming and other psychologically stressful challenges indeed activate GRs and the NMDA/ERK1/2/MSK1/2-Elk-1 signaling pathways resulting in H3S10p-K14ac formation and IEG induction (9).

From a functional perspective, it was of critical importance to show that the NMDA/ERK1/2/MSK1/2-Elk-1 signaling pathway is essential for the forced swimming-induced behavioral immobility response. Using the aforementioned pharmacological and gene deletion approaches, we found that any intervention of this signaling cascade resulted in an impairment of the behavioral response (9, 18, 32). Reports of other investigators have provided strong evidence for an involvement of the NMDA receptor, ERK-MAPK signaling, and MSK1 receptors in the consolidation of spatial and emotional memories associated with the Morris water maze paradigm and contextual fear conditioning (36, 40, 45) (Carter et al., unpublished).

Cross-Talk of Signaling Pathways: A Novel Mechanism of Glucocorticoid Action

Thus, at this stage, the involvement of a second major signaling pathway, the NMDA/ERK1/2/MSK1/2-Elk-1 pathway, in the forced swimming-induced immobility response, and possibly Morris water maze behavior and contextual fear conditioning, had been resolved. The identification of this second pathway however as yet did not provide insight into the mechanism of action of the GRs on behavior. The outstanding question had remained whether GRs affect behavior through interaction with the ERK MAPK pathway. To address this question, the role of GR activity was investigated in the forced swimming-induced ERK1/2, MSK1/2, and Elk-1 phosphorylation by pre-treating rats with the GR antagonist RU38486 before the stress challenge. The GR antagonist did not affect the stress effect on pERK1/2 but strongly inhibited the formation of pMSK1/2 and pElk-1 in the dentate neurons (9) suggesting that the drug was acting downstream from pERK1/2 and more so that pERK1/2 required activated GRs to phosphorylate MSK1/2 and Elk-1. This is consistent with the earlier notion that these glucocorticoid effects do not involve membrane-associated GRs. Follow-up co-immuno-precipitation studies showed that GR and pERK1/2 indeed undergo physical interactions after forced swimming to facilitate the generation of pMSK1/2 and pElk-1 [Figure 2; (9)]. Thus, our data showed evidence for a novel mechanism in which GRs act like a scaffold to facilitate the phosphorylation of MSK1/2 and Elk-1 by pERK1/2 (Figure 2). These effects of GRs take place within 15 min after start of forced swimming, thus not as fast as the reported membrane GR-mediated effects (46) but much quicker than the classical genomic effects of this corticosteroid receptor (30–60 min). Thus, we have uncovered a novel non-genomic mode of action of glucocorticoids, which is taking place in the immediate-early time domain after stress (9).


Figure 2. Psychological stress-activated signaling pathways in dentate gyrus granule neurons driving epigenetic modifications underlying induction of gene transcription and the consolidation of behavioral responses and memory formation. Psychological stress evokes the concomitant activation of the GR and NMDAR-ERK-MAPK pathways. The concomitant activation of ERK1/2 and GR and their subsequent physical interaction facilitates the ability of pERK1/2 to phosphorylate MSK1/2 and Elk-1. Activation of these nuclear kinases results in the phosphorylation and acetylation of histone H3 (H3S10p-K14ac), which drives chromatin remodeling thereby allowing the gene transcription of IEGs like c-fos, egr1, and many other genes. The induction of gene transcription is critical for the consolidation of memory formation associated with the endured event. See text for references of studies supporting this concept. FS, forced swimming; Nov., novelty exposure; MWM, Morris water maze training; FC, contextual fear conditioning.
Anxiety Status as Determinant Factor: Role of GABA

The emotional or anxiety status plays a profound role in the impact of psychologically stressful events on physiological, behavioral, and cognitive responses. Accordingly, it is thought that more anxious individuals make stronger memories of stressful events than less anxious individuals. Since many years, great research efforts are vested into the identification of risk factors for the development of PTSD after traumatic experiences. For instance, physical abuse during childhood, thus previous trauma, has been found to be a risk factor for the development of PTSD in Vietnam War veterans (47, 48). More recent work suggests that people who are more anxious have an increased risk for developing PTSD after a traumatic event (49). We were interested to which degree the anxiety status would affect molecular mechanisms in DG neurons known to be involved in memory formation of stressful events. We wanted to explore the role of anxiety by applying three different approaches.

The first approach made use of the rodent’s innate fear of open spaces and bright light. We had observed that the mild psychological stressor novelty exposure resulted in an enhanced formation of H3S10p-K14ac and induction of c-Fos in the rat DG (25). The novelty paradigm entailed that the group-housed rat would be individually placed in a cage with new bedding in an unfamiliar room illuminated with a rather bright light source (450–500 lx). For rodents, this is a stressful condition as they instinctively fear predation in well-lit open spaces. We observed that exposing rats to a new cage under light conditions akin those in the holding room (100 lx) led to hardly any rise in H3S10p-K14ac and c-Fos in dentate neurons. However, increasing the light intensity (up to 500 lx) progressively resulted in stronger novelty-induced histone and IEG responses in these neurons (25). Thus, increasing the anxiogenicity of the stressful condition enhanced the epigenetic and gene transcriptional responses in the dentate granule neurons.

Secondly, we addressed the factor anxiety by adopting a pharmacological approach by using the anxiolytic or anxiogenic properties of certain GABAergic drugs. A well-known GABA-related anxiolytic drug is the benzodiazepine Lorazepam. Pre-treatment of rats with an anxiolytic dose of Lorazepam (high doses are sedative) resulted in a complete blockade of the H3S10p-K14ac and c-Fos responses to novelty (50). In contrast, application of the partial inverse agonist FG7142 produced strongly augmented novelty-evoked responses in these histone and IEG marks (50). FG7142 has been shown to increase the excitability of neurons in other parts of the brain to airjet and predator exposure (51, 52) and is known to be strongly anxiogenic in rodents and humans (5356). The drug lowers GABA-A function and clearly has actions opposite those of Lorazepam. In aggregate, it is clear that GABA plays a major role in the modulating effect of anxiety on responsiveness of dentate neurons to stressful events.

The third approach concerns the application of the voluntary exercise paradigm. Research over the past 15 years has shown that allowing rats and mice access to a running wheel has major beneficial effects for their health and wellbeing. Rats and mice run voluntarily in a wheel during their active period of the day reaching on average a distance of approximately 4 and 6 km per day, respectively (5759). If this type of voluntary exercise was allowed for several weeks, it proved to have remarkable beneficial effects on a broad range of cellular, physiological, and behavioral processes including neurogenesis in the DG (6063), the central control of HPA axis responses to psychologically stressful events (5759, 64), on sleep quality (increased slow wave sleep) (65), and on cognitive, impulsive, and emotional behavior (60, 66). Using the elevated plus-maze, dark–light box, and the novel cage paradigm, long-term exercise was found to have strongly diminishing effects on anxiety levels in both rats and mice (66). Although still somewhat controversial, regular exercise has been shown to have beneficial effects in anxious and depressed patients (67, 68). Therefore, in many countries exercise is presently prescribed to such patients as a co-treatment in addition to the classical pharmacological and behavioral therapies. We investigated whether exercise would impact on stress-induced behavior. We found that exercised rats showed remarkably different behavior in the novel cage paradigm than sedentary animals (69). When sedentary rats are placed alone in a new cage (lights: 500 lx), they explore the novel environment for the full 30 min the test lasts. However, exercised rats explored the new cage for only 10–15 min after which they laid down to rest or sleep, i.e., the normal behavior a rat displays during the daytime (69). Thus, apparently exercised animals much quicker reach the conclusion that the new environment is safe, which corresponds with their lower anxiety level and possibly enhanced cognition. The reduced anxiety levels in the exercised rats may be due to changes in their GABAergic system. We reported that in addition to distinct changes in the expression of GABA-A receptor subunits (e.g., the extra-synaptic receptor associated delta and alpha-5 subunits), long-term exercise resulted in an increased gene transcription of the GABA synthesizing enzyme GAD67 (70). Furthermore, our recent preliminary findings suggest that GABA synthesis capacity is increased in the DG of exercised rats (Kersanté et al., unpublished observations).

We investigated changes in ERK-MAPK signaling and c-Fos expression in the DG after long-term voluntary exercise. We found that 4 weeks of wheel running resulted in a significant attenuation of the forced swimming-induced increases in the pERK1/2, pMSK1/2, and c-Fos (Collins et al., unpublished observations). Thus, exercised rats show reduced ERK-MAPK and IEG responses to forced swim stress, which may be a consequence of the enhanced GABAergic inhibitory tone in the DG of these animals (50).

Together, this work strongly supports the notion that the anxiety state and the state of the GABAergic system play a pivotal role in the responsiveness of DG granule neurons to psychological stress. In molecular terms, this responsiveness is translated into the likelihood of initiation of ERK-MAPK signaling, epigenetic changes, and induction of (IEG) gene transcription. The findings also suggest that anxiety acts upon these molecular mechanisms through modulation of the GABAergic tone arising from local interneurons in the DG. The GABAergic tone is regulated locally by adjustments in GABAergic synthesis and release capacity, GABA-A receptor subunit composition as well as through afferent inputs from other regions of the brain (see below).

The observation that particularly fearsome and emotional events impact strongly on the extent of activation of dentate granule neurons may underlie the well-known phenomenon that such events are typically very strongly stored into memory, often life-long. In terms of behavioral adaptation and from an evolutionary perspective this makes great sense. Keeping track of potential predators, conspecific enemies, dangerous places, and other threats is crucial to stay safe and avoid violence and predation. Evidently, the level of anxiety awareness and GABAergic control need to be tightly regulated to remain healthy and safe. Hyper-anxiety/low GABAergic control may be profoundly debilitating (humans: social isolation, incapability; animals: social isolation, starvation) whereas low anxiety/high GABAergic control may be dangerous to the individual (humans: carelessness; accident-prone, sensation-seeking behavior: injuries, death; animals: predation). In addition to these state-dependent variables affecting the health condition of humans and animals, repeated challenges leading to chronic stress as well as gravely traumatic life events (e.g., rape, abuse, extreme violence and horror, like in war situations, and other near-death experiences) can lead to depressive and anxiety disorders like PTSD (71, 72) possibly through damage and/or dysfunction of the DG and other parts of the hippocampal formation.

Role of Afferent Input to the Dentate Gyrus

In addition to local (GABAergic) mechanisms regulating DG excitability also extra-hippocampal, afferent input to this hippocampal region is of principal importance. It has been established that information flow through the hippocampus is modulated by various afferent inputs from subcortical regions of the brain including the septum (73), locus coeruleus (74), raphe nuclei (75, 76), amygdala (77, 78), and the supra-mammillary area (SMA) in the hypothalamus (7982).

The Supra-Mammillary Area, a Hypothalamic Region Involved in Integrating Cognitive and Emotional Behavior

The hippocampal formation receives substantial afferent projections from the SMA, which are channeled through the fimbria–fornix. This input has a strong influence on hippocampal theta rhythms and is therefore thought to play an important role in hippocampus-dependent cognitive functions and emotional behavior. Lesions of the mammillary area, including the SMA, have been reported to result in impaired spatial learning and memory in several behavioral tasks including the water maze (8386). The neuroanatomy of the SMA–hippocampus connection is complex and has been investigated for many years. Although the neuroanatomy has not been fully clarified, the projections seem to consist of glutamatergic and GABAergic fibers, which predominantly innervate the DG and to a lesser extent the CA2/CA3a region of the hippocampus (8789). Physiologically, the main effect of SMA stimulation is the facilitation of perforant path-elicited population spikes in the DG (80, 9092). This facilitation has been thought to result from a disinhibition mechanism due to GABAergic SMA–DG afferents inhibiting local dentate GABAergic interneurons (80). Such afferents on DG interneurons have however not been found and it seems that virtually all SMA-DG afferent fibers project to granule neurons in the DG (88). Presently, supported by anatomical studies (88, 9395), it is thought that the SMA potentiates population spikes evoked by perforant path stimulation in the DG via direct excitatory glutamatergic synaptic neurotransmission upon granule neurons (95). Yet, Nakanishi et al. reported that SMA-evoked facilitation of perforant path stimulated EPSP spikes in DG was blocked by the GABA-A blocker picrotoxin leaving the possibility open for a disinhibitory role of GABAergic interneurons in granule neuron excitability (92). It seems that, using both excitatory and inhibitory afferent inputs, the SMA plays a pivotal role in facilitating information flow in the DG in a behavior-dependent manner (96).

Interplay of the SMA and the Amygdala

Evidence has been accumulating that a role of the SMA in controlling information flow in the hippocampus also affects the influence of the amygdala on hippocampus function. Since many years, it has been known that the amygdala plays a pivotal role in hippocampus-mediated learning and memory processes associated with emotion. Although neuroanatomically a link between the amygdala and DG has not been clarified yet, physiological research has provided ample evidence for the existence of such link. It has been shown that lesioning or functionally inhibiting the basolateral amygdala attenuates long-term potentiation (LTP) in the DG (97, 98). Stimulation of this amygdala region facilitates perforant path-DG synaptic responses (78). Furthermore, high-frequency stimulation of the medial amygdala evokes a long-lasting potentiation of perforant path-DG population spikes (99). McGaugh et al. reported functional neuroanatomical evidence that injection of NMDA into the amygdala evokes the induction of c-Fos in the DG (100, 101).

Thus, afferent projections from the SMA and the amygdala to the DG play an important facilitatory role in merging the influence of anxiety/emotionality with the multimodular sensory information flow through the DG. This physiological mechanism appears to be instrumental in facilitating the formation of memories of emotionally charged life events. At the DG cellular level, the coordinated inputs from the SMA and amygdala resulting in an enhanced excitability of dentate neurons may translate into an enhanced likelihood of NMDAR-mediated excitation of dentate granule neurons resulting downstream into activation of signaling, epigenetic, and gene transcriptional changes known to be required for the consolidation of memory formation. Clearly, research is required to provide substance to this notion.

Significance of H3S10p-K14ac Formation for Induction of Gene Transcription

The induction of the IEGs, c-Fos and Egr-1, in DG granule neurons after psychological stressors such as forced swimming and novelty requires the formation of dual histone mark H3S10p-K14ac (9, 25, 32). However, although in vitro research suggests that the association of this dual histone mark with IEG gene induction is a general phenomenon, in the brain in vivo this is not the case. Using ChIP, we found that the dual histone mark is only associated with the c-Fos and Egr-1 promoter region in the DG but not in the neocortex (9). In view of evidence that the H3S10p-K14ac histone mark is associated with the opening of dormant genes (28, 30, 31), we have concluded that under baseline conditions the c-Fos and Egr-1 genes and possibly many other genes in the DG are in a different, i.e., condensed, state and require the formation of the dual histone mark in their gene promoters for de-condensation and gene transcription (1315, 34, 102).

Presently, it is unknown why IEG induction in DG neurons, as opposed to other neurons in the brain, is critically dependent of formation of H3S10p-K14ac. Possibly, as part of the physiological, sparse activation scheme applied in the DG, gene induction in dentate neurons is required to be strictly regulated, apparently to safeguard that after an environmental challenge only a few percent of DG neurons are responding. Thus, dentate neuron activation and function is controlled at several levels including the tonic GABAergic control and other afferent (SMA, amygdala) control at the cellular level, the NMDA receptor-mediated Ca2+/ERK-MAPK requirement at the signaling level and the requirement of H3-S10pK14ac-driven chromatin remodeling at the molecular level. In addition to the dual histone mark, our recent work suggests that also the DNA methylation status of distinct CpGs within the fos and egr1 gene promoters play a critical role in the transcriptional activity at these genes after stress (Saunderson et al., in preparation). This additional epigenetic mechanism adds another level of molecular control of IEG expression in DG neurons.

Recently, we postulated that these histone modifications and the opening of the chromatin structure are needed to provide transcription factors like CREB access to their DNA binding sites (14, 15). CREB is a well-known trans-activator of c-Fos and Egr-1 gene transcription. Our concept attempts to explain the observation that, although CREB phosphorylation occurs ubiquitously in the DG after stressful challenges like forced swimming (6), c-Fos and Egr-1 are only expressed in those DG granule neurons in which H3S10p-K14ac has been generated (9, 25, 32).

To obtain deeper insight into the functional implications of the H3S10p-K14ac mark in dentate neurons, we have started ChIP studies in combination with Illumina next-generation sequencing (ChIP-Seq). This genome-wide screen will deliver detailed knowledge about the identity of all genes specifically associated with the dual histone mark, other histone marks as well as those genes, which show binding of distinct transcription factors within their gene promoters. Thus, in other words, this state-of-the-art approach will inform us about which genes in the activated dentate neurons are specifically involved in adaptive changes in these neurons after a stressful challenge. This information will help to obtain insight into the functional changes occurring in these neurons and furthermore will assist in the elucidation of the functional properties of as yet unknown genes.


As mentioned at the beginning of this text, adaptation to stressful events in our lives, which includes the formation of memories of such events, is of critical importance to maintain health and well-being. Anxiety disorders like PTSD and major depressive disorder are thought to be the consequence of disruptions and impairments in this adaptive process. The likelihood of developing this kind of mental disorders is higher in individuals who have been subject to early life abuse or neglect, or have endured massive, acute traumatic events or chronic psychological stress. The observation that “only” 10–20% of people develop a mental disorder under such conditions suggests the involvement of genetic factors as well as “phenotypic” factors (e.g., age, lifestyle, socio-economic status), which determine an individuals’ resilience to stress.

The DG plays a pivotal role in the encoding of incoming sensory and other information from the entorhinal cortex involving pattern separation (103, 104) that enables the CA3 to utilize this information for further processing and integration, which is key to the formation of event-associated memories. This NMDAR-dependent process in sparse dentate granule neurons evokes long-term molecular and cellular changes in these neurons, which subserve long-lasting changes in functional properties of these cells. Our work has helped to gain insight into the signaling, epigenetic, and gene transcriptional mechanisms evoked in these dentate neurons after a psychologically stressful challenge. Previously, we have suggested that these mechanisms act like a molecular switch allowing hippocampal information processing and thereby the consolidation of memories associated with the challenge (13). The generation of the dual histone mark H3S10p-K14ac, driven by concomitant activation of the GR and NMDAR/ERK1/2/MSK1-Elk-1 pathways, plays a central role in kick-starting gene transcription required for long-term changes in neuron function. This concept provides the framework for the identification and investigation of the gene products involved beyond the IEGs c-Fos and Egr-1. Furthermore, it invites investigating the role of afferent input from subcortical brain structures in the regulation of DG granule neuron function at the molecular level. Together, this research opens up the opportunity for preclinical and clinical studies on the pathophysiological significance of the participating genes and thereby hopefully for drug development to combat stress-related mental disorders.

Conflict of Interest Statement

The author declares that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.


The author wishes to thank his research group members who contributed to the studies described in this review: A. Bilang-Bleuel, S. Ulbricht, S. K. Droste, Y. Chandramohan, A. Papadopoulos, A. Collins, S. Hesketh, M. Gutièrrez-Mecinas, A. Shaikh, H. Morfett, A. F. Trollope, E. Saunderson, S. Carter, and K. R. Mifsud, and his collaborators A. C. E. Linthorst, F. Kersanté, S. Arthur, J. Uney, D. J. Nutt, and J. Mill. The author is grateful for the generous support from the Max Planck Society (Max Planck Institute of Psychiatry, Munich, Germany, till 2003) and the Medical Research Council (MRC) and the Biotechnological and Biological Science Research Council (BBSRC; BB/G02507X/1) in the United Kingdom.

References available at the Frontiers site

Why Are Conservatives so Annoyed by Neil DeGrasse Tyson? Because, You Know, Science

This is so pathetic - the National Review thinks we have a "nerd problem."

Is it not enough to support a creationism museum, a publicly funded Noah's Ark theme park ($43 million dollars worth of tax breaks in Kentucky, while the state cuts social programs and education), and to have several states trying to eradicate evolution from the science classroom in public schools? How ironic is it that in some areas now, if you want your kids to get a good science education you have to send them to parochial schools?

So, the topper of all the toppers, the National Review (once seen as the intellectual mouthpiece for the conservative movement) is waging war on intellectuals, you know, those nerdy science types. So much for being intellectual. Now they are just dumb, and really afeared of them brainy folks.

Top of the list, of course, is Neil DeGrasse Tyson, along with Paul Krugman, Rachel Maddow (not to mention Ezra Klein and Nate Silver), and anyone else who believes in science and thinks that "facts" should come with references.

This part of the article is funny...
Nerds used to be 90-pound weaklings who never got the girl. Then nerds built the Internet and personal computers. Now nerds rule the world. Or at least, that part of it that isn’t controlled by retrograde politicians.
The funny thing, to me, is that I am a nerd, and used to get called a nerd, or a geek, a lot when I was in 4th-7th grades. Then an amazing thing happened, my genetics kicked in and suddenly I was a nerdy 13 year old who was 6 feet tall and weighed 180 lbs (see what I did there? science!). No one called me names anymore.

But I digress.

This article from Salon is about how the right someone is so scared of science that they didn't just stick their heads in the sand, rather, they seem to have lost their heads in their collective arses.

National Review declares war against the nerds

Why are conservatives so annoyed by Neil DeGrasse Tyson? Because, you know, science

Andrew Leonard
Wednesday, Jul 30, 2014

Paul Krugman, Neil deGrasse Tyson, Rachel Maddow (Credit: AP/Fredrik Persson/Richard Shotwell/Chris Pizzello/Photo collage by Salon)

If you prick a nerd, does he not bleed? If you wrong us, shall we not revenge? Like fire ants boiling out of their underground lair, overcome with rage at whatever dastard disturbed their slumber, nerds everywhere are taking to the streets, apoplectic at the most foul attack on entitled smarts this nation has seen since Dwight D. Eisenhower called Robert Oppenheimer a pencil-necked geek.

OK, I don’t actually have a link for that Eisenhower thing. Maybe it didn’t happen. But I do have a link for National Review’s cover-story assaulting nerd-dom, “Smarter Than Thou.” A cover story that begins by attacking none other than Neil DeGrasse Tyson — the Holy Roman Nerd-Emperor himself! — as the “the fetish and totem of the extraordinarily puffed-up ‘nerd’ culture that has of late started to bloom across the United States.”

Oh boy, them’s fightin’ words. I can tell you, nerds are spitting mad. They’ve got the torches and pitchforks ready to hand. They’re going to burn some shit down!

Well, actually, probably not. What they’re really going to do is craft some sarcastically amusing tweets, because you know, they’re nerds. That’s how nerds roll. And maybe they’ll write a clever smartphone app that can be deployed to mock people who don’t accept the science of climate change. Because, contra National Review’s Charles Cooke, who seems to believe that the new primacy of the nerd is some kind of collectivist scam by Ezra Klein and Nate Silver and Rachel Maddow and “anybody who conforms to the Left’s social and moral precepts while wearing glasses and babbling about statistics,” the cultural ascendancy of the nerd has nothing to do with who wears horn-rims on TV and everything to do with the massive technological transformation of society over the last 20 years. Nerds used to be 90-pound weaklings who never got the girl. Then nerds built the Internet and personal computers. Now nerds rule the world. Or at least, that part of it that isn’t controlled by retrograde politicians. The primacy of nerd culture is not an Ezra Klein affectation; it’s fallout from the fact that nerds are making an awful lot of money these days.

Cooke, after leading off with Tyson, fatally exposes his hand by defining the leaders of the new nerd menace as a group that, oddly, all share politics that National Review doesn’t approve of.
Prominent examples include MSNBC’s Melissa Harris-Perry, Rachel Maddow, Steve Kornacki, and Chris Hayes; Vox’s Ezra Klein, Dylan Matthews, and Matt Yglesias; the sabermetrician Nate Silver; the economist Paul Krugman; the atheist Richard Dawkins; former vice president Al Gore; celebrity scientist Bill Nye…
Later, Cooke says that “the nerds of MSNBC and beyond are not actually nerds — with scientific training and all that it entails — but the popular kids indulging in a fad.” I’m not sure it’s all that smart to attack the likes of Dawkins or Krugman, (or even Bill Nye, a mechanical engineer who worked for Boeing) as lacking scientific training. But Cooke’s real problem is that the “real” nerds — the ones that aren’t on MSNBC, also, by and large, share the political beliefs he scorns.

Cooke never mentions Silicon Valley, which is odd, because the fact that the world’s greatest preponderance of nerds also happens to be the United States’ most formidable bastion of left-wing progressive politics would seem to support his thesis that nerds are pinkos. (And yes, I know, there are a lot of libertarian nerds — but guess what, those guys believe in science too!) There’s a reason for Cooke’s omission. Acknowledging that nerds — you know, the guys and gals who invented the microchip and the PC and the smartphone — actually do have a grasp of scientific fact, which leads them to take seriously the problem of historically unprecedented carbon dioxide emissions and the idiocy of rewriting school science textbooks to include dogma about creationism and intelligent design, is a disastrous dead end for conservatives.

If Cooke honestly wanted to grapple with the cultural cachet of nerd-dom, he’d have to answer questions such as why a poll by the Pew Research Service found that in 2009 that only six percent of scientists identify as Republican. He’d have to grapple with the true reasons for Tyson’s popularity, which have much more to do with how grateful a significant portion of this nation is for someone who can rebut ignorance and religious propaganda with humor and clarity than with any political identification. He’d have to face up to the sobering reality that the majority of people who understand how the world works in terms of biology and physics and mathematics also think that our overheating globe is a serious problem.

Instead, Cooke argues that leftists are embracing the nerd-designation because it says to the world what they are not: “… which is southern, politically conservative, culturally traditional, religious in some sense, patriotic, driven by principle rather than the pivot tables of Microsoft Excel, and in any way attached to the past.”

Oh NO! Cooke dares attack nerdish chart-love! That really stings. But you know what? It’s not the fault of liberal nerds that Ken Hamm’s Creation Museum, which claims that dinosaurs were wiped out in a flood 4300 years ago, is in the South. And for better or worse, it’s not the fault of liberal nerds that large swathes of Republican politicians in the South have lined up behind the breath-taking rejection of the scientific method that is symbolized by the Creation Museum.

But this thing about attachment to the past — well maybe Cooke’s got a point there. Nerds love science fiction, in part because we love the promise of the future, a promise of Star Trek abundance and material prosperity for everyone. We look at the past, at centuries that included slavery and child labor and infant mortality and Inquisitions and the lack of female suffrage, and we think, we can do better than that. We can progress.

That’s why we like Neil DeGrasse Tyson. Because we believe that civilization is going somewhere, and that if the future isn’t better than the past, then we’re just wasting our time on this planet.

Andrew Leonard is a staff writer at Salon. On Twitter, @koxinga21.