Showing posts with label vision. Show all posts
Showing posts with label vision. Show all posts

Thursday, December 26, 2013

Scientific American - Highlights from Neuroscience 2013

Scientific American Magazine

Here are 5 of the more interesting research presentations at the recent annual meeting of the Society for Neuroscience, as determined by the editors of Scientific American. Access PDFs of the abstracts from this year's meeting or download them to your e-reader or mobile device.

Highlights from Neuroscience 2013

The massive annual meeting of the Society for Neuroscience brought together tens of thousands of researchers exploring the workings of mind and brain


By John Matson

Sunday, October 27, 2013

Scientists Seek to Decode People's Thoughts, Dreams, and Even Their Intentions (Nature)


From Nature News, Kerri Smith offers an overview of the current research by neuroscientists who are seeking to decode human thoughts, dreams, and intentions. The trick is to convert neuronal electrical patterns of synapses, networks, and modules into something that appears coherent to us.

Full Citation:
Smith, K. (2013, Oct 24). Brain decoding: Reading minds. Nature, 502(7472): 428–430. doi:10.1038/502428a

Brain decoding: Reading minds

By scanning blobs of brain activity, scientists may be able to decode people's thoughts, their dreams and even their intentions. 

Kerri Smith
23 October 2013


Cracking the code - See how scientists decode vision, dreamscapes and hidden mental states from brain activity.


Jack Gallant perches on the edge of a swivel chair in his lab at the University of California, Berkeley, fixated on the screen of a computer that is trying to decode someone's thoughts.

On the left-hand side of the screen is a reel of film clips that Gallant showed to a study participant during a brain scan. And on the right side of the screen, the computer program uses only the details of that scan to guess what the participant was watching at the time.

Anne Hathaway's face appears in a clip from the film Bride Wars, engaged in heated conversation with Kate Hudson. The algorithm confidently labels them with the words 'woman' and 'talk', in large type. Another clip appears — an underwater scene from a wildlife documentary. The program struggles, and eventually offers 'whale' and 'swim' in a small, tentative font.

“This is a manatee, but it doesn't know what that is,” says Gallant, talking about the program as one might a recalcitrant student. They had trained the program, he explains, by showing it patterns of brain activity elicited by a range of images and film clips. His program had encountered large aquatic mammals before, but never a manatee.

Groups around the world are using techniques like these to try to decode brain scans and decipher what people are seeing, hearing and feeling, as well as what they remember or even dream about.
Listen

Neuroscientists can predict what a person is seeing or dreaming by looking at their brain activity.

Go to full podcast
Media reports have suggested that such techniques bring mind-reading “from the realms of fantasy to fact”, and “could influence the way we do just about everything”. The Economist in London even cautioned its readers to “be afraid”, and speculated on how long it will be until scientists promise telepathy through brain scans. Although companies are starting to pursue brain decoding for a few applications, such as market research and lie detection, scientists are far more interested in using this process to learn about the brain itself. Gallant's group and others are trying to find out what underlies those different brain patterns and want to work out the codes and algorithms the brain uses to make sense of the world around it. They hope that these techniques can tell them about the basic principles governing brain organization and how it encodes memories, behaviour and emotion (see 'Decoding for dummies').

Applying their techniques beyond the encoding of pictures and movies will require a vast leap in complexity. “I don't do vision because it's the most interesting part of the brain,” says Gallant. “I do it because it's the easiest part of the brain. It's the part of the brain I have a hope of solving before I'm dead.” But in theory, he says, “you can do basically anything with this”.

Beyond blobology

Brain decoding took off about a decade ago1, when neuroscientists realized that there was a lot of untapped information in the brain scans they were producing using functional magnetic resonance imaging (fMRI). That technique measures brain activity by identifying areas that are being fed oxygenated blood, which light up as coloured blobs in the scans. To analyse activity patterns, the brain is segmented into little boxes called voxels — the three-dimensional equivalent of pixels — and researchers typically look to see which voxels respond most strongly to a stimulus, such as seeing a face. By discarding data from the voxels that respond weakly, they conclude which areas are processing faces. 
Decoding techniques interrogate more of the information in the brain scan. Rather than asking which brain regions respond most strongly to faces, they use both strong and weak responses to identify more subtle patterns of activity. Early studies of this sort proved, for example, that objects are encoded not just by one small very active area, but by a much more distributed array. 
These recordings are fed into a 'pattern classifier', a computer algorithm that learns the patterns associated with each picture or concept. Once the program has seen enough samples, it can start to deduce what the person is looking at or thinking about. This goes beyond mapping blobs in the brain. Further attention to these patterns can take researchers from asking simple 'where in the brain' questions to testing hypotheses about the nature of psychological processes — asking questions about the strength and distribution of memories, for example, that have been wrangled over for years. Russell Poldrack, an fMRI specialist at the University of Texas at Austin, says that decoding allows researchers to test existing theories from psychology that predict how people's brains perform tasks. “There are lots of ways that go beyond blobology,” he says. 
In early studies1, 2 scientists were able to show that they could get enough information from these patterns to tell what category of object someone was looking at — scissors, bottles and shoes, for example. “We were quite surprised it worked as well as it did,” says Jim Haxby at Dartmouth College in New Hampshire, who led the first decoding study in 2001. 
Soon after, two other teams independently used it to confirm fundamental principles of human brain organization. It was known from studies using electrodes implanted into monkey and cat brains that many visual areas react strongly to the orientation of edges, combining them to build pictures of the world. In the human brain, these edge-loving regions are too small to be seen with conventional fMRI techniques. But by applying decoding methods to fMRI data, John-Dylan Haynes and Geraint Rees, both at the time at University College London, and Yukiyasu Kamitani at ATR Computational Neuroscience Laboratories, in Kyoto, Japan, with Frank Tong, now at Vanderbilt University in Nashville, Tennessee, demonstrated in 2005 that pictures of edges also triggered very specific patterns of activity in humans3, 4. The researchers showed volunteers lines in various orientations — and the different voxel mosaics told the team which orientation the person was looking at. 
ILLUSTRATION BY PETER QUINNELL; PHOTO: KEVORK DJANSEZIAN/GETTY
 
Edges became complex pictures in 2008, when Gallant's team developed a decoder that could identify which of 120 pictures a subject was viewing — a much bigger challenge than inferring what general category an image belongs to, or deciphering edges. They then went a step further, developing a decoder that could produce primitive-looking movies of what the participant was viewing based on brain activity5. 
From around 2006, researchers have been developing decoders for various tasks: for visual imagery, in which participants imagine a scene; for working memory, where they hold a fact or figure in mind; and for intention, often tested as the decision whether to add or subtract two numbers. The last is a harder problem than decoding the visual system says Haynes, now at the Bernstein Centre for Computational Neuroscience in Berlin, “There are so many different intentions — how do we categorize them?” Pictures can be grouped by colour or content, but the rules that govern intentions are not as easy to establish. 
Gallant's lab has preliminary indications of just how difficult it will be. Using a first-person, combat-themed video game called Counterstrike, the researchers tried to see if they could decode an intention to go left or right, chase an enemy or fire a gun. They could just about decode an intention to move around; but everything else in the fMRI data was swamped by the signal from participants' emotions when they were being fired at or killed in the game. These signals — especially death, says Gallant — overrode any fine-grained information about intention. 
The same is true for dreams. Kamitani and his team published their attempts at dream decoding in Science earlier this year6. They let participants fall asleep in the scanner and then woke them periodically, asking them to recall what they had seen. The team tried first to reconstruct the actual visual information in dreams, but eventually resorted to word categories. Their program was able to predict with 60% accuracy what categories of objects, such as cars, text, men or women, featured in people's dreams. 
The subjective nature of dreaming makes it a challenge to extract further information, says Kamitani. “When I think of my dream contents, I have the feeling I'm seeing something,” he says. But dreams may engage more than just the brain's visual realm, and involve areas for which it's harder to build reliable models. 

Reverse engineering 

Decoding relies on the fact that correlations can be established between brain activity and the outside world. And simply identifying these correlations is sufficient if all you want to do, for example, is use a signal from the brain to command a robotic hand (see Nature 497, 176–178; 2013). But Gallant and others want to do more; they want to work back to find out how the brain organizes and stores information in the first place — to crack the complex codes the brain uses. 
That won't be easy, says Gallant. Each brain area takes information from a network of others and combines it, possibly changing the way it is represented. Neuroscientists must work out post hoc what kind of transformations take place at which points. Unlike other engineering projects, the brain was not put together using principles that necessarily make sense to human minds and mathematical models. “We're not designing the brain — the brain is given to us and we have to figure out how it works,” says Gallant. “We don't really have any math for modelling these kinds of systems.” Even if there were enough data available about the contents of each brain area, there probably would not be a ready set of equations to describe them, their relationships, and the ways they change over time. 
Computational neuroscientist Nikolaus Kriegeskorte at the MRC Cognition and Brain Sciences Unit in Cambridge, UK, says that even understanding how visual information is encoded is tricky — despite the visual system being the best-understood part of the brain (see Nature 502, 156–158; 2013). “Vision is one of the hard problems of artificial intelligence. We thought it would be easier than playing chess or proving theorems,” he says. But there's a lot to get to grips with: how bunches of neurons represent something like a face; how that information moves between areas in the visual system; and how the neural code representing a face changes as it does so. Building a model from the bottom up, neuron by neuron, is too complicated — “there's not enough resources or time to do it this way”, says Kriegeskorte. So his team is comparing existing models of vision to brain data, to see what fits best. 

Real world 

Devising a decoding model that can generalize across brains, and even for the same brain across time, is a complex problem. Decoders are generally built on individual brains, unless they're computing something relatively simple such as a binary choice — whether someone was looking at picture A or B. But several groups are now working on building one-size-fits-all models. “Everyone's brain is a little bit different,” says Haxby, who is leading one such effort. At the moment, he says, “you just can't line up these patterns of activity well enough”. 
Standardization is likely to be necessary for many of the talked-about applications of brain decoding — those that would involve reading someone's hidden or unconscious thoughts. And although such applications are not yet possible, companies are taking notice. Haynes says that he was recently approached by a representative from the car company Daimler asking whether one could decode hidden consumer preferences of test subjects for market research. In principle it could work, he says, but the current methods cannot work out which of, say, 30 different products someone likes best. Marketers, he says, should stick to what they know for now. “I'm pretty sure that with traditional market research techniques you're going to be much better off.” 
Companies looking to serve law enforcement have also taken notice. No Lie MRI in San Diego, California, for example, is using techniques related to decoding to claim that it can use a brain scan to distinguish a lie from a truth. Law scholar Hank Greely at Stanford University in California, has written in the Oxford Handbook of Neuroethics (Oxford University Press, 2011) that the legal system could benefit from better ways of detecting lies, checking the reliability of memories, or even revealing the biases of jurors and judges. Some ethicists have argued that privacy laws should protect a person's inner thoughts and desires as private, but Julian Savulescu, a neuroethicist at the University of Oxford, UK, sees no problem in principle with deploying decoding technologies. “People have a fear of it, but if it's used in the right way it's enormously liberating.” Brain data, he says, are no different from other types of evidence. “I don't see why we should privilege people's thoughts over their words,” he says. 
Haynes has been working on a study in which participants tour several virtual-reality houses, and then have their brains scanned while they tour another selection. Preliminary results suggest that the team can identify which houses their subjects had been to before. The implication is that such a technique might reveal whether a suspect had visited the scene of a crime before. The results are not yet published, and Haynes is quick to point out the limitations to using such a technique in law enforcement. What if a person has been in the building, but doesn't remember? Or what if they visited a week before the crime took place? Suspects may even be able to fool the scanner. “You don't know how people react with countermeasures,” he says. 
Other scientists also dismiss the implication that buried memories could be reliably uncovered through decoding. Apart from anything else, you need a 15-tonne, US$3-million fMRI machine and a person willing to lie very still inside it and actively think secret thoughts. Even then, says Gallant, “just because the information is in someone's head doesn't mean it's accurate”. Right now, psychologists have more reliable, cheaper ways of getting at people's thoughts. “At the moment, the best way to find out what someone is going to do,” says Haynes, “is to ask them.”  

References 

1. Haxby, J. V. et al. Science 293, 2425–2430 (2001). Article 
2. Cox, D. D. & Savoy, R. L. et al. NeuroImage 19, 261–270 (2003). Article 
3. Haynes, J.-D. & Rees, G. Nature Neurosci. 8, 686–691 (2005). Article 
4. Kamitani, Y. & Tong, F. Nature Neurosci. 8, 679–685 (2005). Article 
5. Nishimoto, S. et al. Curr. Biol. 21, 1641–1646 (2011). Article 
6. Horikawa, T., Tamaki, M., Miyawaki, Y. & Kamitani, Y. Science 340, 639–642 (2013). Article 

Related stories and links from Nature.com

Sunday, January 15, 2012

Tom Albright - Perception and the Beholder's Share

This is a cool and geeky video from The Science Network. Visual perception is one of the ways scientists delve into how we construct reality as a visual field. One of the interesting discoveries is that the Buddhists, in a way, have had it right all along, we create an image of reality in our brains that is only a rough hologram of the external "reality," whatever that may be (since our machines are only extensions of our own senses, this can become an infinite regress).




Perception and the Beholder's Share

Tom Albright



  • Download


  • Report an issue with this video »


  • Tom Albright talks with Roger Bingham about visual perception, his research into how cortex represents features from images, what schizophrenia can teach us about perception, and his interest in art and architecture.

    Tom Albright is Professor and Director of the Vision Center Laboratory at the Salk Institute for Biological studies. His laboratory focuses on the neural structures and events underlying the perception of motion, form, and color.

    Monday, January 02, 2012

    TEDxPittsburgh - Michael Tarr - Everyday Halucinations

    Michael Tarr is a cognitive scientist who studies the neural, cognitive, and computational mechanisms used by the brain to recognize objects and faces - and it turns our that our brains take some liberty with reality in doing so.

    TEDxPittsburgh - Michael Tarr - Everyday Halucinations




    Much of what we experience is illusion.

    Michael is Professor of Cognitive Neuroscience and Professor of Psychology in Carnegie Mellon University's College of Humanities and Social Sciences and Co-Director of the Center for the Neural Basis of Cognition, a joint project of Carnegie Mellon University and the University of Pittsburgh. He is best known for his research into the neural, cognitive, and computational mechanisms underlying human object and face recognition. His work provides scientists with a better understanding of how the brain organizes itself with visual experience. The National Academy of Sciences has awarded him the Troland Award, given annually to recognize unusual achievement and further empirical research in psychology.

    Sunday, May 08, 2011

    Alva Noë - Seeing Pictures Is Harder Than It Looks

    http://farm5.static.flickr.com/4113/5016479943_cb579e1fac.jpg

    When Time Magazine darkened the OJ Simpson mug shot on their cover, the manipulation of the photo implied Simpson's guilt (in our culture, we associate dark with evil, light with good). They received a lot of flack for that manipulation - and rightfully so. But it happens all the time in the media, especially is photography of products and models.

    Philosopher and neuroscientist Alva Noë explains why
    Seeing Pictures Is Harder Than It Looks at NPR's 13.7 Cosmos and Culture blog - when the images are more important, we may need those 1,000 words to provide the correct context. He essentially is addressing the issue of the pictures of Osama bin Laden's death and whether or not they should be released when there is no way to control how they will be seen and contextualized.

    Context gives it meaning
    Dimitar Dilkoff/AFP/Getty Images

    Context gives it meaning

    They say a picture is worth a thousand words. Maybe so. But it is also the case that sometimes you need a thousand words to understand the image.

    This may be why President Obama isn't ready to release photographs of a dead Osama bin Laden.

    To see what I mean, recall the recent furore about VegNews' use of altered stock photos of meat dishes to illustrate articles on vegan cooking. This kind of thing is pretty much standard practice in the magazine world.

    That photo spread on ice cream sundaes? It may be illustrated with photos of carefully modeled Play-Doh and shaving cream; they are much easier to work with than liquifying milk products. And anyway, if the point of the photo is to show you how your sundaes can look, what does it matter that the depicted sundae isn't a sundae? The point is that it looks like one. But if pictures of fake ice cream are OK, then why not faked pictures of vegan food? From this standpoint, the vegan outburst can seem, well, naive and childish.

    But maybe we can cut the outraged vegan readership of VegNews some slack. How would you feel if that photo of soldiers lounging in their barracks that accompanies the military spending article in the paper this morning was actually a stock photo of actors? Surprised? Bemused? Would you feel deceived?

    Pictures evoke simple and powerful emotions. The appropriateness of those emotions depends on our appreciation of exactly what the pictures are showing. And the thing is, we can't take an appreciation of exactly what the pictures are showing for granted. Does the photo illustrate how a good sundae, or a nice soybean spare ribs, can or ought to look? Or does it document actual deserts and vegan cooking? The web of background assumptions and attitudes that shape our attitude to pictures is very complicated.

    The picture on its own — the construction of pixels or pigments — doesn't self-certify what it is being used to show. We see what pictures show us because, usually, we already know what they are trying to show us. We've read the article, or the caption. We're familiar with the conventions and traditions of wedding photography and family photo albums.

    Pictures seem transparent to us only because we view them against the background of the communicative context in which we find ourselves and in which we are at home. Pictures have a rhetoric, and it is a rhetoric with which we are by and large familiar.

    I am not sure whether the president is right to withhold the pictures; I do think that neither he nor any one else has rhetorical control over how these pictures will be seen. To let them loose on the world without that control is dangerous, maybe even irresponsible.

    Critics who point out that the photos are going to come out eventually anyway are certainly right. Perhaps, by then, we'll have collectively figured out what they will be used to show.


    Sunday, December 05, 2010

    Perceptual changes – a key to our consciousness

    Cool - the different ways that our mind processes visual information can apparently provide some clues to how our brain creates consciousness.

    Perceptual changes – a key to our consciousness

    19 November 2010 Max Planck Institute for Biological Cybernetics

    With his coat billowing behind him and his right eye tightly closed, Captain Blackbeard watches the endless sea with his telescope. Suddenly the sea disappears as the pirate opens his right eye. The only thing he sees is his hand holding the telescope. And then, a moment later, the sea is back again. What happened was a change in perception. Our brain usually combines the two slightly divergent images of our eyes into a single consistent perception. However, if the visual information does not match, only one image is seen at a time. This phenomenon is called "binocular rivalry". Researchers around Andreas Bartels at the Werner Reichardt Centre for Integrative Neurosciences (CIN) and the Max Planck Institute for Biological Cybernetics in Tübingen, Germany used this phenomenon to decipher a key mechanism of the brain functions that contributes to conscious visual perception.

    We do not consciously perceive everything around us, even if it falls into our field of vision. The overwhelming abundance of information forces our brain to focus on a few important things; our perception is an ongoing process of selecting, grouping and interpreting visual information. Even though we have two eyes, our brain combines the two impressions. Experts call this binocular vision. Yet, if conflicting information is presented to the eyes, only the input to one eye is perceived at a time, while the other is suppressed. Our perception changes at specific intervals between the two images - a phenomenon called “binocular rivalry”. This process occurs automatically without voluntary control.

    The scientists, Natalia Zaretskaya, Axel Thielscher, Nikos Logothetis and Andreas Bartels demonstrated that the frequency at which alternations between the visual information occurred could be experimentally reduced: Two different stimuli, a house and a face, were projected into the right and left eyes, respectively, of 15 experimental subjects. Since the brain could not match the pictures, alternations in perception occurred. When the scientists temporarily applied an alternating magnetic field to the subjects’ posterior parietal cortex, a higher-order area of the brain, the perception of each individual image was prolonged.

    “Our findings suggest that the parietal cortex is causally involved in selecting the information that is consciously perceived,” explains Natalia Zaretskaya, a Ph.D. student involved in the project. „It also demonstrates the important role of this area in visual awareness.”

    “Understanding the neural circuits underlying the percepts and their switches might give us some insight into how consciousness is implemented in the brain, or at least into the dynamic processes underlying it“, explains Andreas Bartels, scientist at the CIN.

    http://tuebingen.mpg.de/en/homepage/detail/perceptual-changes-a-key-to-our-consciousness.html

    Full bibliographic information:
    Natalia Zaretskaya, Axel Thielscher, Nikos K. Logothetis, Andreas Bartels: Disrupting parietal function prolongs dominance durations in binocular rivalry, Current Biology (2010); doi: 10.1016/j.cub.2010.10.046

    Tuesday, January 26, 2010

    Richard O. Brown: The Neuroscience of Nothing

    From UCTV.
    Richard O. Brown, Staff Neuroscientist at The Exploratorium, talks about the interaction between mind and matter and visual perception. He talks about and illustrates with fascinating visuals three concepts: 1. There is nothing out there and we perceive nothing which he feels comes closest to blackness. 2. There is something out there and we can't perceive it, which comes closest to invisibility. 3. There is nothing out there and we're still experiencing or perceiving something.